Loading...

PAC002009_s group (Species)

Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; KE159571_g; PAC002009_s group;

This taxon was found in 4.67% of laboratory mice cecum, 2.5% of laboratory mice colon, 0.8% of laboratory mice feces, 1.02% of wild mice ileocecum (with ≥1% threshold).

Relative abundance

Relative abundance in each sample

Sample accession Project accession Sampling location Genotype Vendor Origin Count Relative abundance (%)
SRS347290 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 51 3.17
SRS347311 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 330 3.14
SRS347291 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 165 2.22
SRS876849 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1741 2.21
SRS347285 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 196 2.19
SRS347292 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 184 1.91
SRS2290161 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 839 1.71
SRS347340 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 135 1.58
SRS2529793 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 343 1.57
SRS876942 SRP056326 Feces A/J Envigo Laboratory 658 1.08
SRS876858 SRP056326 Feces A/J Envigo Laboratory 767 1.03
SRS347287 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 107 1.00
SRS2290031 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 125 0.91
SRS876803 SRP056326 Feces A/J The Jackson Laboratory Laboratory 560 0.85
SRS2290203 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 223 0.68
SRS2529800 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 188 0.67
SRS347305 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 56 0.64
SRS347310 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 70 0.64
SRS347286 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 77 0.62
SRS347312 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 31 0.57
SRS876857 SRP056326 Feces A/J Envigo Laboratory 359 0.54
SRS347306 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 44 0.53
SRS876774 SRP056326 Feces A/J Envigo Laboratory 269 0.44
SRS876891 SRP056326 Feces A/J Envigo Laboratory 298 0.43
SRS2290057 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 42 0.41
SRS876777 SRP056326 Feces A/J Envigo Laboratory 257 0.38
SRS4889876 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 96 0.36
SRS876778 SRP056326 Feces A/J Envigo Laboratory 210 0.35
SRS1945731 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 205 0.35
SRS2290211 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 49 0.34
SRS876896 SRP056326 Feces A/J Envigo Laboratory 211 0.32
SRS876874 SRP056326 Feces A/J Envigo Laboratory 56 0.30
SRS876862 SRP056326 Feces A/J Envigo Laboratory 198 0.30
SRS2290160 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 40 0.28
SRS876799 SRP056326 Feces A/J Envigo Laboratory 190 0.28
SRS347283 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 17 0.28
SRS876855 SRP056326 Feces A/J The Jackson Laboratory Laboratory 190 0.27
SRS347284 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 18 0.25
SRS940678 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 69 0.24
SRS347360 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 22 0.24
SRS347361 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 18 0.23
SRS876944 SRP056326 Feces A/J Envigo Laboratory 129 0.23
SRS876773 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 135 0.20
SRS4889870 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 58 0.18
SRS4889872 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 73 0.17
SRS1945775 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 89 0.17
SRS1945772 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 87 0.17
SRS347326 SRP012588 Cecum DBA/2JR The Jackson Laboratory Laboratory 12 0.16
SRS347313 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 13 0.15
SRS1945732 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 75 0.14
SRS876860 SRP056326 Feces A/J Envigo Laboratory 96 0.14
SRS347293 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 9 0.13
SRS2290164 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 19 0.13
SRS876861 SRP056326 Feces A/J Envigo Laboratory 91 0.13
SRS2290217 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 21 0.13
SRS347320 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 4 0.12
SRS876869 SRP056326 Feces A/J Envigo Laboratory 82 0.12
SRS1945735 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 59 0.11
SRS347282 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 9 0.11
SRS4889693 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 35 0.11
SRS2290083 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 13 0.10
SRS4889325 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 41 0.10
SRS2290099 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 12 0.09
SRS347359 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 4 0.09
SRS2529846 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 36 0.09
SRS1945770 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 45 0.09
SRS347314 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 7 0.09
SRS347307 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 5 0.08
SRS347358 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 9 0.08
SRS2529849 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 23 0.08
SRS347309 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 4 0.07
SRS347354 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 7 0.07
SRS4889617 SRP200540 Cecum Mus musculus domesticus Wild mouse Wild 35 0.07
SRS1945771 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 35 0.07
SRS347351 SRP012588 Cecum NZO/HILtJ The Jackson Laboratory Laboratory 5 0.07
SRS347303 SRP012588 Cecum C57BL/6 The Jackson Laboratory Laboratory 9 0.07
SRS347362 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 8 0.07
SRS347304 SRP012588 Cecum C57BL/6 The Jackson Laboratory Laboratory 8 0.06
SRS347339 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 5 0.06
SRS876853 SRP056326 Feces A/J Envigo Laboratory 43 0.06
SRS347335 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 5 0.06
SRS4889699 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 18 0.05
SRS876893 SRP056326 Feces A/J Envigo Laboratory 35 0.05
SRS347288 SRP012588 Cecum 129S1/SvImJ The Jackson Laboratory Laboratory 3 0.05
SRS347317 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 4 0.05
SRS876868 SRP056326 Feces A/J Envigo Laboratory 35 0.05
SRS4889874 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 33 0.05
SRS347325 SRP012588 Cecum DBA/2JR The Jackson Laboratory Laboratory 4 0.05
SRS347297 SRP012588 Cecum C57BL/6 The Jackson Laboratory Laboratory 3 0.05
SRS347327 SRP012588 Cecum DBA/2JR The Jackson Laboratory Laboratory 4 0.05
SRS876850 SRP056326 Feces A/J The Jackson Laboratory Laboratory 31 0.05
SRS4889694 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 22 0.04
SRS876798 SRP056326 Feces A/J Envigo Laboratory 31 0.04
SRS1945773 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 21 0.04
SRS2290048 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 5 0.04
SRS2290242 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.04
SRS1945730 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 20 0.04
SRS876871 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 29 0.04
SRS940859 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 10 0.03
SRS4889324 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 12 0.03
SRS347308 SRP012588 Cecum C3H/Ri The Jackson Laboratory Laboratory 7 0.03
SRS4889695 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 12 0.03
SRS347322 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 2 0.03
SRS2290014 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.03
SRS4889814 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 12 0.03
SRS347294 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 2 0.03
SRS347295 SRP012588 Cecum A/J The Jackson Laboratory Laboratory 4 0.03
SRS2063203 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 17 0.03
SRS876867 SRP056326 Feces A/J Envigo Laboratory 18 0.03
SRS4889875 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 9 0.03
SRS2063201 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 17 0.02
SRS347337 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 2 0.02
SRS4889697 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 8 0.02
SRS347319 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 6 0.02
SRS2290073 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 8 0.02
SRS1945729 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 12 0.02
SRS1945734 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 11 0.02
SRS2290162 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 4 0.02
SRS876852 SRP056326 Feces A/J Envigo Laboratory 12 0.02
SRS347342 SRP012588 Cecum NOD/LtJ The Jackson Laboratory Laboratory 2 0.02
SRS1945769 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 11 0.02
SRS2063205 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 12 0.02
SRS347353 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 2 0.02
SRS347316 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 2 0.02
SRS347321 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 2 0.02
SRS1945768 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 8 0.02
SRS4889873 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.02
SRS940871 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 2 0.02
SRS2290212 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.02
SRS876768 SRP056326 Feces BALB/c Envigo Laboratory 8 0.01
SRS2290238 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2063199 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 8 0.01
SRS876805 SRP056326 Feces A/J The Jackson Laboratory Laboratory 9 0.01
SRS2290050 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS347356 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 1 0.01
SRS4889318 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 2 0.01
SRS1945727 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 7 0.01
SRS347345 SRP012588 Cecum NZO/HILtJ The Jackson Laboratory Laboratory 1 0.01
SRS941318 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 4 0.01
SRS1945728 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
SRS4889326 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.01
SRS4889701 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.01
SRS876915 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 5 0.01
SRS1945767 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
SRS1945733 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 6 0.01
SRS876898 SRP056326 Feces A/J The Jackson Laboratory Laboratory 8 0.01
SRS4889871 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 4 0.01
SRS347296 SRP012588 Cecum C57BL/6 The Jackson Laboratory Laboratory 1 0.01
SRS4889327 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 6 0.01
SRS2290208 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290204 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 3 0.01
SRS2290024 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290051 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290159 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS2290072 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.01
SRS4889826 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 3 0.01
SRS3667867 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 3 0.01
SRS4889812 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS347357 SRP012588 Cecum PWK/PhJ The Jackson Laboratory Laboratory 1 0.01
SRS876919 SRP056326 Feces A/J Envigo Laboratory 4 0.01
SRS2290205 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS2290078 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 2 0.01
SRS4889813 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 2 0.01
SRS876804 SRP056326 Feces A/J The Jackson Laboratory Laboratory 4 0.01
SRS4889319 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.01
SRS876821 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 3 0.01
SRS347392 SRP012588 Cecum WSB/EiJ The Jackson Laboratory Laboratory 1 0.00
SRS941317 SRP058488 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS2063211 SRP102269 Feces C57BL/6 National Laboratory Animal Center Laboratory 1 0.00
SRS876875 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS876916 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 3 0.00
SRS2529799 SRP145069 Colon C57BL/6 Janvier Labs Laboratory 1 0.00
SRS876851 SRP056326 Feces A/J The Jackson Laboratory Laboratory 3 0.00
SRS4889611 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876943 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876818 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 3 0.00
SRS2290241 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889711 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS2290200 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889810 SRP200540 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS347315 SRP012588 Cecum CAST/EiJ The Jackson Laboratory Laboratory 1 0.00
SRS2290201 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS4889869 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS876892 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS876802 SRP056326 Feces A/J The Jackson Laboratory Laboratory 2 0.00
SRS3667864 SRP157514 Feces C57BL/6 Charles River Laboratories Laboratory 1 0.00
SRS4889811 SRP200540 Feces C57BL/6 Taconic Biosciences Laboratory 1 0.00
SRS876801 SRP056326 Feces A/J Envigo Laboratory 2 0.00
SRS2290207 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876935 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 2 0.00
SRS876921 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS2290079 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS1945766 SRP098151 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS2290175 SRP109346 Ileocecum Mus musculus domesticus Wild mouse Wild 1 0.00
SRS876845 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876841 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876843 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876822 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876833 SRP056326 Feces C57BL/6 The Jackson Laboratory Laboratory 1 0.00
SRS876883 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876848 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876823 SRP056326 Feces BALB/c Envigo Laboratory 1 0.00
SRS876952 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876781 SRP056326 Feces A/J The Jackson Laboratory Laboratory 1 0.00
SRS876809 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876854 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876771 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00
SRS876800 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876785 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876927 SRP056326 Feces C57BL/6 Envigo Laboratory 1 0.00
SRS876917 SRP056326 Feces A/J Envigo Laboratory 1 0.00
SRS876795 SRP056326 Feces BALB/c The Jackson Laboratory Laboratory 1 0.00